BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E03LP1|AL428555
(295 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1170 582 e-166
>3x_Contig1170
Length = 4668
Score = 582 bits (293), Expect = e-166
Identities = 294/295 (99%)
Strand = Plus / Plus
Query: 1 gatctcttcgcctggaatcgacaaaaagaaaccgcaattactttgccattcgagccaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1752 gatctcttcgcctggaatcgacaaaaagaaaccgcaattactttgccattcgagccaacc 1811
Query: 61 aaaggaccgaaacaaaaattcaccgaccgctatgtagaacagccggcagcaggacgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 aaaggaccgaaacaaaaattcaccgaccgctatgtagaacagccggcagcaggacgaaaa 1871
Query: 121 agaaagcgcaatgagatttccgtttttgtctgaaacagatactttctgttacttgattcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 agaaagcgcaatgagatttccgtttttgtctgaaacagatactttctgttacttgattcg 1931
Query: 181 atttgatttgattcactttgtcacagttttactttttcaattttggcaatggatctggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 atttgatttgattcactttgtcacagttttactttttcaattttggcaatggatctggaa 1991
Query: 241 acaggaatcatagattattactgtttatattttatwacagtatatatatatatat 295
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1992 acaggaatcatagattattactgtttatattttataacagtatatatatatatat 2046
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6349
Number of Sequences: 1807
Number of extensions: 6349
Number of successful extensions: 1460
Number of sequences better than 1.0e-20: 1
length of query: 295
length of database: 10,358,551
effective HSP length: 16
effective length of query: 279
effective length of database: 10,329,639
effective search space: 2881969281
effective search space used: 2881969281
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)